Showing GR-Card for GR00522: Tuberculosis (HGVRS1158)

Record Information
Version1.0
Creation Date2019-04-04 18:01:17 UTC
Last Updated2020-04-06 20:49:15 UTC
GWAS-ROCS IDGR00522
Study Information
Condition/PhenotypeTuberculosis
GWAS Central Data Set IDHGVRS1158
PubMed ID20694014
Meta-Analysis (Yes/No)No
Control Subjects6907
Case Subjects3110
SNPs
NameOdds RatioAllele Frequencyp-value
rs43314261.190.487.0e-09
rs93735231.30.811.0e-06
rs123860261.660.042.0e-06
rs23357041.190.22.0e-06
rs7120391.210.493.0e-06
rs14345791.460.064.0e-06
rs65458831.20.525.0e-06
rs42573081.550.046.0e-06
rs100056031.20.657.0e-06
rs19486321.550.048.0e-06
rs1604411.20.418.0e-06
rs80059621.20.638.0e-06
rs78215651.20.618.0e-06
rs77875311.220.299.0e-06
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Simulated Population
ROC PlotGr00522
AUROC0.562142
Logistic Regression Equationlog(p/(1 - p)) = 1.137 + 0.355(rs4331426) - 0.212(rs9373523) - 0.409(rs12386026) - 0.006(rs2335704) - 0.508(rs712039) + 0.294(rs1434579) + 0.051(rs6545883) - 0.358(rs4257308) - 0.238(rs10005603) + 0.001(rs1948632) - 0.084(rs160441) + 0.008(rs8005962) + 0.235(rs7821565) - 0.098(rs7787531)
Heritability0.015
Regression TypeOLS
Download FileGR00522.csv