GWAS-ROCS Database: Showing GR-Card for GR00473: Schizophrenia (HGVRS4581)

Record Information

Version

1.0

Creation Date

2019-04-04 18:01:16 UTC

Last Updated

2020-04-06 20:49:14 UTC

GWAS-ROCS ID

GR00473

Study Information

Condition/Phenotype

Schizophrenia

GWAS Central Data Set ID

HGVRS4581

PubMed ID

25056061

Meta-Analysis (Yes/No)

Control Subjects

113075

Case Subjects

35754

SNPs

Name	Odds Ratio	Allele Frequency	p-value
rs115329265	1.205	0.85	3.0e-31
rs1702294	1.1274	0.809	3.0e-19
rs11191419	1.10375	0.64	6.0e-19
rs2007044	1.09649	0.376	3.0e-18
rs4129585	1.087	0.424	2.0e-15
rs35518360	1.16686	0.078	8.0e-15
rs4391122	1.0846	0.468	1.0e-14
rs2851447	1.0929	0.259	2.0e-14
rs4702	1.0846	0.438	8.0e-14
rs12887734	1.088	0.287	1.0e-13
rs75968099	1.085	0.324	1.0e-13
rs8042374	1.093	0.725	2.0e-13
rs13240464	1.083	0.647	3.0e-13
rs10791097	1.076	0.46	1.0e-12
rs11693094	1.07643	0.542	2.0e-12
rs7893279	1.125	0.889	2.0e-12
rs12826178	1.18203	0.929	2.0e-12
rs6704768	1.07527	0.448	2.0e-12
rs1378559	1.09	0.831	2.0e-12
rs12129573	1.078	0.358	2.0e-12
rs9636107	1.07527	0.497	3.0e-12
rs55661361	1.07991	0.665	3.0e-12
rs11682175	1.07181	0.458	1.0e-11
rs6065094	1.07759	0.678	1.0e-11
rs950169	1.08342	0.743	2.0e-11
rs9607782	1.087	0.232	2.0e-11
rs72934570	1.14548	0.9203	2.0e-11
rs6434928	1.07643	0.357	2.0e-11
rs2514218	1.07875	0.686	3.0e-11
rs36068923	1.08814	0.197	3.0e-11
rs17194490	1.101	0.156	3.0e-11
rs2535627	1.071	0.529	4.0e-11
rs75059851	1.091	0.797	4.0e-11
rs12691307	1.073	0.51	5.0e-11
rs7432375	1.07181	0.551	7.0e-11
rs111294930	1.094	0.782	1.0e-10
rs5937157	1.0661	0.241	2.0e-10
rs12704290	1.10619	0.877	3.0e-10
rs12903146	1.067	0.52	3.0e-10
rs11210892	1.07066	0.323	3.0e-10
rs4523957	1.071	0.627	3.0e-10
rs2905426	1.07066	0.372	4.0e-10
rs140505938	1.09409	0.836	4.0e-10
rs4648845	1.072	0.527	9.0e-10
rs7405404	1.077	0.223	1.0e-09
rs4766428	1.068	0.474	1.0e-09
rs10520163	1.065	0.47	1.0e-09
rs6466055	1.068	0.332	1.0e-09
rs9420	1.068	0.311	2.0e-09
rs117074560	1.17786	0.9524	2.0e-09

show all show less

Simulated Population

ROC Plot

AUROC

0.54068

Logistic Regression Equation

log(p/(1 - p)) = 1.506 - 0.869(rs115329265) - 0.215(rs1702294) - 1.187(rs11191419) - 0.926(rs2007044) - 0.043(rs4129585) - 0.303(rs35518360) - 14.405(rs4391122) - 0.108(rs2851447) - 0.084(rs4702) - 0.067(rs12887734) - 0.203(rs75968099) - 0.059(rs8042374) + 0.713(rs13240464) - 0.114(rs10791097) - 0.071(rs11693094) - 0.114(rs7893279) - 0.102(rs12826178) + 0.028(rs6704768) - 0.207(rs1378559) - 0.692(rs12129573) - 0.064(rs9636107) - 0.012(rs55661361) + 0.149(rs11682175) + 0.007(rs6065094) + 0.055(rs950169) + 0.085(rs9607782) + 0.196(rs72934570) + 0.456(rs6434928) + 0.071(rs2514218) + 0.060(rs36068923) - 0.074(rs17194490) + 0.049(rs2535627) - 0.080(rs75059851) - 0.032(rs12691307) + 0.032(rs7432375) + 0.148(rs111294930) + 0.121(rs5937157) + 0.167(rs12704290) + 0.116(rs12903146) - 0.044(rs11210892) + 0.406(rs4523957) + 0.990(rs2905426) + 0.832(rs140505938) - 0.025(rs4648845) - 0.087(rs7405404) + 0.180(rs4766428) + 14.309(rs10520163) + 0.200(rs6466055) + 0.192(rs9420) - 0.092(rs117074560)

Heritability

0.007

Regression Type

OLS

Download File

GR00473.csv