Showing GR-Card for GR00472: Schizophrenia (HGVRS3822)

Record Information
Version1.0
Creation Date2019-04-04 18:01:16 UTC
Last Updated2020-04-06 20:49:14 UTC
GWAS-ROCS IDGR00472
Study Information
Condition/PhenotypeSchizophrenia
GWAS Central Data Set IDHGVRS3822
PubMed ID23974872
Meta-Analysis (Yes/No)No
Control Subjects38072
Case Subjects21827
SNPs
NameOdds RatioAllele Frequencyp-value
rs1140021401.670.7639.0e-14
rs70851041.110.6454.0e-13
rs64610491.110.5716.0e-13
rs11985881.120.7862.0e-12
rs10067371.10.3325.0e-12
rs176918881.160.8861.0e-10
rs41295851.090.4392.0e-10
rs107893691.10.3834.0e-10
rs79408661.090.4872.0e-09
rs175046221.240.053.0e-09
rs29054241.090.3483.0e-09
rs23730001.090.4027.0e-09
rs68782841.090.3639.0e-09
rs48011311.080.5821.0e-08
rs46875521.090.6411.0e-08
rs29490061.10.1921.0e-08
rs129918361.080.3481.0e-08
rs115323221.090.3182.0e-08
rs144031.10.7732.0e-08
rs7783711.090.2812.0e-08
rs119955721.120.1353.0e-08
rs15387741.090.743.0e-08
rs29100321.080.4694.0e-08
rs1717481.080.4714.0e-08
rs43801871.080.5296.0e-08
rs45239571.080.6166.0e-08
rs65504351.080.3446.0e-08
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Simulated Population
ROC PlotGr00472
AUROC0.540498
Logistic Regression Equationlog(p/(1 - p)) = 1.386 - 16.406(rs114002140) - 0.268(rs7085104) - 0.306(rs6461049) - 0.069(rs1198588) - 0.334(rs1006737) - 0.066(rs17691888) - 0.072(rs4129585) - 0.073(rs10789369) - 0.190(rs7940866) - 0.267(rs17504622) - 16.117(rs2905424) - 0.049(rs2373000) - 0.034(rs6878284) + 0.002(rs4801131) + 0.177(rs4687552) - 0.102(rs2949006) + 15.962(rs12991836) + 0.025(rs11532322) + 15.655(rs14403) + 0.059(rs778371) - 0.069(rs11995572) + 0.099(rs1538774) + 0.149(rs2910032) + 0.058(rs171748) + 0.273(rs4380187) + 0.209(rs4523957) + 0.474(rs6550435)
Heritability0.007
Regression TypeOLS
Download FileGR00472.csv