Showing GR-Card for GR00444: Prostate cancer (HGVRS6252)

Record Information
Version1.0
Creation Date2019-04-04 18:01:16 UTC
Last Updated2020-04-06 20:49:13 UTC
GWAS-ROCS IDGR00444
Study Information
Condition/PhenotypeProstate cancer
GWAS Central Data Set IDHGVRS6252
PubMed ID25217961
Meta-Analysis (Yes/No)No
Control Subjects43737
Case Subjects43303
SNPs
NameOdds RatioAllele Frequencyp-value
rs66257111.040.416.0e-12
rs28070311.070.183.0e-11
rs124803281.130.935.0e-11
rs175996291.080.226.0e-11
rs100094091.080.322.0e-10
rs48442891.040.391.0e-09
rs71536481.110.062.0e-09
rs801308191.140.912.0e-09
rs47132661.060.523.0e-09
rs1153069671.060.653.0e-09
rs769340341.130.915.0e-09
rs562325061.060.459.0e-09
rs80146711.060.591.0e-08
rs22387761.080.82.0e-08
rs6362911.180.162.0e-08
rs1154571351.070.222.0e-08
rs10414491.060.443.0e-08
rs92877191.060.463.0e-08
rs120514431.060.343.0e-08
rs17751481.060.274.0e-08
rs94431891.080.144.0e-08
rs176944931.080.144.0e-08
rs112147751.070.715.0e-08
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Simulated Population
ROC PlotGr00444
AUROC0.52763
Logistic Regression Equationlog(p/(1 - p)) = 0.188 + 0.207(rs6625711) + 0.004(rs2807031) + 0.044(rs12480328) - 12.470(rs17599629) - 0.127(rs10009409) + 0.156(rs4844289) - 0.080(rs7153648) - 0.083(rs80130819) - 0.069(rs4713266) - 0.004(rs115306967) - 0.147(rs76934034) - 0.204(rs56232506) + 0.036(rs8014671) - 0.014(rs2238776) - 0.568(rs636291) + 12.384(rs115457135) - 0.113(rs1041449) + 0.058(rs9287719) + 0.122(rs12051443) - 0.009(rs1775148) + 0.461(rs9443189) + 0.082(rs17694493) + 0.049(rs11214775)
Heritability0.003
Regression TypeOLS
Download FileGR00444.csv