Showing GR-Card for GR00273: Inflammatory bowel disease (HGVRS2705)

Record Information
Version1.0
Creation Date2019-04-04 18:01:13 UTC
Last Updated2020-04-06 20:49:10 UTC
GWAS-ROCS IDGR00273
Study Information
Condition/PhenotypeInflammatory bowel disease
GWAS Central Data Set IDHGVRS2705
PubMed ID23128233
Meta-Analysis (Yes/No)No
Control Subjects38457
Case Subjects38607
SNPs
NameOdds RatioAllele Frequencyp-value
rs112090262.010.9338.0e-161
rs117425701.20.6052.0e-82
rs107814991.190.4124.0e-56
rs44097641.180.4911.0e-54
rs21889621.160.4251.0e-52
rs28368781.180.7335.0e-48
rs31979991.180.2961.0e-47
rs107616591.170.5436.0e-46
rs107586691.170.3498.0e-45
rs68716261.180.3371.0e-42
rs30245051.210.167.0e-42
rs18012741.120.5092.0e-38
rs129465101.160.4654.0e-38
rs117418611.250.0933.0e-37
rs21552191.150.5094.0e-36
rs24135831.210.8334.0e-33
rs75545111.160.7251.0e-32
rs42469051.140.7093.0e-32
rs71345991.10.3789.0e-32
rs76089101.140.3949.0e-32
rs28232861.160.7089.0e-30
rs115642581.330.0256.0e-29
rs30913161.120.7221.0e-26
rs72824901.110.3912.0e-26
rs18932171.170.1573.0e-26
rs110100671.120.3462.0e-25
rs60625041.10.6841.0e-23
rs129425471.10.586.0e-22
rs265281.10.4511.0e-21
rs69202201.10.2061.0e-21
rs37491711.140.1673.0e-21
rs18193331.080.5237.0e-21
rs9179971.10.2313.0e-20
rs65684211.110.3018.0e-20
rs9217201.080.6098.0e-20
rs170850071.110.1833.0e-19
rs118791911.140.7972.0e-18
rs12505461.10.6043.0e-18
rs125689301.10.8211.0e-17
rs22669591.110.1861.0e-16
rs5298661.120.8032.0e-16
rs48456041.140.8574.0e-16
rs172936321.070.2356.0e-16
rs65458001.110.4456.0e-16
rs65860301.120.8479.0e-16
rs356756661.110.8381.0e-15
rs42462151.080.3382.0e-15
rs9252551.090.5573.0e-15
rs176941081.10.2826.0e-15
rs14568961.090.6887.0e-15
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Simulated Population
ROC PlotGr00273
AUROC0.665052
Logistic Regression Equationlog(p/(1 - p)) = 1.189 - 1.190(rs11209026) - 3.487(rs11742570) - 1.060(rs10781499) - 1.618(rs4409764) - 0.164(rs2188962) - 0.356(rs2836878) - 1.344(rs3197999) - 16.928(rs10761659) - 1.623(rs10758669) - 16.799(rs6871626) - 17.142(rs3024505) + 0.310(rs1801274) - 0.672(rs12946510) - 0.264(rs11741861) - 0.146(rs2155219) - 16.590(rs2413583) - 1.287(rs7554511) - 0.088(rs4246905) + 1.102(rs7134599) - 1.166(rs7608910) - 1.189(rs2823286) + 0.143(rs11564258) + 1.960(rs3091316) + 1.136(rs7282490) + 0.726(rs1893217) + 16.355(rs11010067) + 0.331(rs6062504) + 0.037(rs12942547) + 1.426(rs26528) + 0.096(rs6920220) + 16.245(rs3749171) + 1.542(rs1819333) - 16.342(rs917997) + 0.292(rs6568421) + 0.258(rs921720) - 0.405(rs17085007) - 0.699(rs11879191) + 3.164(rs1250546) + 0.353(rs12568930) + 0.380(rs2266959) + 0.531(rs529866) + 0.155(rs4845604) + 16.546(rs17293632) + 0.416(rs6545800) + 0.031(rs6586030) + 16.459(rs35675666) + 1.569(rs4246215) + 16.357(rs925255) + 0.592(rs17694108) + 0.621(rs1456896)
Heritability0.109
Regression TypeOLS
Download FileGR00273.csv