Showing GR-Card for GR00221: Esophageal cancer (HGVRS3682)

Record Information
Version1.0
Creation Date2019-04-04 18:01:12 UTC
Last Updated2020-04-06 20:49:09 UTC
GWAS-ROCS IDGR00221
Study Information
Condition/PhenotypeEsophageal cancer
GWAS Central Data Set IDHGVRS3682
PubMed ID24121790
Meta-Analysis (Yes/No)No
Control Subjects10117
Case Subjects3175
SNPs
NameOdds RatioAllele Frequencyp-value
rs117890151.230.7172.0e-07
rs26872011.20.3036.0e-07
rs104192261.190.4568.0e-07
rs23420021.220.2149.0e-07
rs64795271.180.5112.0e-06
rs46103021.180.594.0e-06
rs21781461.180.5874.0e-06
rs171721851.470.9465.0e-06
Simulated Population
ROC PlotGr00221
AUROC0.537109
Logistic Regression Equationlog(p/(1 - p)) = 1.645 - 0.018(rs11789015) - 0.077(rs2687201) - 0.196(rs10419226) - 0.179(rs2342002) + 0.049(rs6479527) - 0.048(rs4610302) - 0.053(rs2178146) - 0.311(rs17172185)
Heritability0.006
Regression TypeOLS
Download FileGR00221.csv