Showing GR-Card for GR00217: Esophageal cancer (HGVRS1602)

Record Information
Version1.0
Creation Date2019-04-04 18:01:12 UTC
Last Updated2020-04-06 20:49:09 UTC
GWAS-ROCS IDGR00217
Study Information
Condition/PhenotypeEsophageal cancer
GWAS Central Data Set IDHGVRS1602
PubMed ID21642993
Meta-Analysis (Yes/No)No
Control Subjects6201
Case Subjects6017
SNPs
NameOdds RatioAllele Frequencyp-value
rs20743561.560.132.0e-31
rs20143001.430.838.0e-22
rs110660151.380.197.0e-21
rs22742231.340.214.0e-20
rs100526571.490.782.0e-19
rs110662801.30.212.0e-15
rs104847611.330.097.0e-12
rs80306721.560.031.0e-11
rs100587282.040.985.0e-09
rs98688731.190.821.0e-07
rs67722091.490.973.0e-07
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Simulated Population
ROC PlotGr00217
AUROC0.571934
Logistic Regression Equationlog(p/(1 - p)) = 0.693 - 0.733(rs2074356) - 1.474(rs2014300) + 0.090(rs11066015) - 13.446(rs2274223) - 0.367(rs10052657) + 13.327(rs11066280) + 0.335(rs10484761) - 0.469(rs8030672) + 0.000(rs10058728) + 1.221(rs9868873) + 0.034(rs6772209)
Heritability0.021
Regression TypeOLS
Download FileGR00217.csv