Showing GR-Card for GR00153: Colorectal cancer (HGVRS6161)

Record Information
Version1.0
Creation Date2019-04-04 18:01:10 UTC
Last Updated2020-04-06 20:49:08 UTC
GWAS-ROCS IDGR00153
Study Information
Condition/PhenotypeColorectal cancer
GWAS Central Data Set IDHGVRS6161
PubMed ID24836286
Meta-Analysis (Yes/No)No
Control Subjects50207
Case Subjects31947
SNPs
NameOdds RatioAllele Frequencyp-value
rs1745371.160.599.0e-21
rs107956681.150.65.0e-15
rs6471611.150.312.0e-14
rs69832671.140.385.0e-14
rs111961721.140.681.0e-12
rs24232791.130.313.0e-12
rs107742141.140.371.0e-10
rs108494321.140.826.0e-10
rs66877581.120.249.0e-09
rs18004691.090.481.0e-08
rs72296391.20.162.0e-08
rs7040171.10.322.0e-08
rs126035261.10.33.0e-08
rs64696561.090.655.0e-08
rs49483171.10.277.0e-08
rs38028421.090.383.0e-07
rs124123911.080.427.0e-07
rs123092741.110.853.0e-06
rs104112101.120.823.0e-06
rs107528811.070.395.0e-06
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Simulated Population
ROC PlotGr00153
AUROC0.55496
Logistic Regression Equationlog(p/(1 - p)) = 0.644 - 0.134(rs174537) - 0.449(rs10795668) - 0.625(rs647161) - 29.649(rs6983267) - 0.008(rs11196172) - 0.832(rs2423279) - 0.293(rs10774214) - 0.203(rs10849432) + 0.006(rs6687758) + 0.086(rs1800469) - 0.229(rs7229639) + 0.744(rs704017) + 0.572(rs12603526) + 0.333(rs6469656) + 0.147(rs4948317) + 14.914(rs3802842) + 0.364(rs12412391) + 0.125(rs12309274) - 0.037(rs10411210) + 14.734(rs10752881)
Heritability0.012
Regression TypeOLS
Download FileGR00153.csv