Showing GR-Card for GR00149: Colorectal cancer (HGVRS4881)

Record Information
Version1.0
Creation Date2019-04-04 18:01:10 UTC
Last Updated2020-04-06 20:49:08 UTC
GWAS-ROCS IDGR00149
Study Information
Condition/PhenotypeColorectal cancer
GWAS Central Data Set IDHGVRS4881
PubMed ID26151821
Meta-Analysis (Yes/No)No
Control Subjects29625
Case Subjects23024
SNPs
NameOdds RatioAllele Frequencyp-value
rs49398271.130.542.0e-15
rs69832671.12360.54.0e-14
rs168927661.204820.13.0e-12
rs38028421.12360.281.0e-10
rs353603281.140.163.0e-09
rs60668251.090.644.0e-09
rs47795841.120.811.0e-08
rs31845041.090.532.0e-08
rs8124811.090.582.0e-08
rs732081201.160.113.0e-08
rs111901641.090.294.0e-08
rs44442351.086960.495.0e-08
rs49462601.070.536.0e-08
rs9612531.090.371.0e-07
rs38249991.075270.531.0e-06
rs32179011.086960.412.0e-06
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Simulated Population
ROC PlotGr00149
AUROC0.537373
Logistic Regression Equationlog(p/(1 - p)) = 0.509 - 0.935(rs4939827) - 0.868(rs6983267) - 0.185(rs16892766) - 0.092(rs3802842) + 0.026(rs35360328) - 0.038(rs6066825) - 0.161(rs4779584) + 0.322(rs3184504) + 0.203(rs812481) - 0.019(rs73208120) - 0.020(rs11190164) + 0.565(rs4444235) + 12.843(rs4946260) + 0.127(rs961253) - 12.170(rs3824999) - 0.051(rs3217901)
Heritability0.006
Regression TypeOLS
Download FileGR00149.csv