Showing GR-Card for GR00144: Colorectal cancer (HGVRS2702)

Record Information
Version1.0
Creation Date2019-04-04 18:01:10 UTC
Last Updated2020-04-06 20:49:08 UTC
GWAS-ROCS IDGR00144
Study Information
Condition/PhenotypeColorectal cancer
GWAS Central Data Set IDHGVRS2702
PubMed ID23266556
Meta-Analysis (Yes/No)No
Control Subjects21771
Case Subjects15752
SNPs
NameOdds RatioAllele Frequencyp-value
rs69832671.130.51.0e-11
rs49398271.120.522.0e-10
rs119037571.160.164.0e-08
rs32178101.20.166.0e-08
rs109112511.090.579.0e-08
rs32179011.10.413.0e-07
rs131307871.090.433.0e-07
rs38028421.110.294.0e-07
rs593361.090.484.0e-07
rs47795841.120.185.0e-07
rs170949831.130.133.0e-06
rs20573141.080.53.0e-06
rs48138021.10.347.0e-06
rs21283821.110.828.0e-06
rs19124531.070.419.0e-06
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Simulated Population
ROC PlotGr00144
AUROC0.529878
Logistic Regression Equationlog(p/(1 - p)) = 0.444 - 0.364(rs6983267) - 0.385(rs4939827) - 0.250(rs11903757) - 0.650(rs3217810) + 0.075(rs10911251) + 0.046(rs13130787) - 14.939(rs3217901) - 0.157(rs3802842) + 0.279(rs59336) + 0.642(rs4779584) + 0.138(rs17094983) + 0.311(rs2057314) - 0.087(rs4813802) - 0.046(rs2128382) + 15.020(rs1912453)
Heritability0.004
Regression TypeOLS
Download FileGR00144.csv