Showing GR-Card for GR00094: Breast cancer (HGVRS4984)

Record Information
Version1.0
Creation Date2019-04-04 18:01:09 UTC
Last Updated2020-04-06 20:49:07 UTC
GWAS-ROCS IDGR00094
Study Information
Condition/PhenotypeBreast cancer
GWAS Central Data Set IDHGVRS4984
PubMed ID29058716
Meta-Analysis (Yes/No)No
Control Subjects100594
Case Subjects21468
SNPs
NameOdds RatioAllele Frequencyp-value
rs673972001.180.323.0e-17
rs100696901.180.264.0e-16
rs37573221.140.323.0e-12
rs72970511.136360.768.0e-09
rs93974371.20.076.0e-08
rs2006481891.136360.83.0e-07
rs32154011.111110.693.0e-07
rs65627601.12360.764.0e-07
rs113749641.09890.571.0e-06
rs749112611.351350.982.0e-06
Simulated Population
ROC PlotGr00094
AUROC0.535731
Logistic Regression Equationlog(p/(1 - p)) = 1.962 - 16.208(rs67397200) - 0.085(rs10069690) + 16.078(rs3757322) - 16.135(rs7297051) - 0.100(rs9397437) - 0.037(rs200648189) - 0.054(rs3215401) + 16.104(rs6562760) + 0.035(rs11374964) - 0.256(rs74911261)
Heritability0.005
Regression TypePenalized
Download FileGR00094.csv