Showing GR-Card for GR00092: Breast cancer (HGVRS3319)

Record Information
Version1.0
Creation Date2019-04-04 18:01:09 UTC
Last Updated2020-04-06 20:49:07 UTC
GWAS-ROCS IDGR00092
Study Information
Condition/PhenotypeBreast cancer
GWAS Central Data Set IDHGVRS3319
PubMed ID23535733
Meta-Analysis (Yes/No)No
Control Subjects76649
Case Subjects10707
SNPs
NameOdds RatioAllele Frequencyp-value
rs20462101.150.4235.0e-16
rs38036621.140.2676.0e-13
rs81701.150.1919.0e-13
rs42457391.140.262.0e-12
rs107713991.20.8952.0e-12
rs100696901.150.3215.0e-12
rs6164881.10.6651.0e-08
rs66789141.10.591.0e-08
rs110759951.110.244.0e-08
rs127106961.10.365.0e-08
rs109951901.120.8461.0e-07
rs178174491.090.5266.0e-07
rs60019301.140.1072.0e-06
rs175300681.090.2373.0e-06
rs115718331.520.4966.0e-06
rs14326791.080.4357.0e-06
rs173569071.090.7029.0e-06
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Simulated Population
ROC PlotGr00092
AUROC0.5711
Logistic Regression Equationlog(p/(1 - p)) = 2.316 + 0.501(rs2046210) + 0.178(rs3803662) - 0.188(rs8170) - 0.468(rs4245739) - 0.271(rs10771399) - 0.383(rs10069690) + 0.668(rs616488) + 0.047(rs6678914) + 0.190(rs11075995) + 0.230(rs12710696) - 0.054(rs10995190) - 0.045(rs17817449) - 0.019(rs6001930) + 0.312(rs17530068) - 1.319(rs11571833) - 0.016(rs1432679) + 0.088(rs17356907)
Heritability0.020
Regression TypeOLS
Download FileGR00092.csv