Showing GR-Card for GR00079: Breast cancer (HGVRS1059)

Record Information
Version1.0
Creation Date2019-04-04 18:01:09 UTC
Last Updated2020-04-06 20:49:07 UTC
GWAS-ROCS IDGR00079
Study Information
Condition/PhenotypeBreast cancer
GWAS Central Data Set IDHGVRS1059
PubMed ID20453838
Meta-Analysis (Yes/No)No
Control Subjects17120
Case Subjects16235
SNPs
NameOdds RatioAllele Frequencyp-value
rs29815791.430.424.0e-31
rs38036621.30.263.0e-15
rs6143671.150.153.0e-15
rs109951901.160.855.0e-15
rs133870421.210.492.0e-10
rs7040101.070.394.0e-09
rs8893121.220.285.0e-09
rs10119701.090.173.0e-08
rs23802051.060.575.0e-07
rs15624301.170.586.0e-07
rs49737681.160.476.0e-07
rs9091161.170.537.0e-07
rs37573181.30.073.0e-06
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Simulated Population
ROC PlotGr00079
AUROC0.594556
Logistic Regression Equationlog(p/(1 - p)) = 0.165 - 16.683(rs2981579) - 0.701(rs3803662) + 0.193(rs614367) - 0.088(rs10995190) - 0.762(rs13387042) + 0.517(rs704010) + 0.040(rs889312) + 0.306(rs1011970) + 0.525(rs2380205) - 0.008(rs1562430) + 16.724(rs4973768) - 0.189(rs909116) - 0.242(rs3757318)
Heritability0.036
Regression TypeOLS
Download FileGR00079.csv