GWAS-ROCS Database: Showing GR-Card for GR00074: Bladder cancer (HGVRS6707)

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Record Information

Version

1.0

Creation Date

2019-04-04 18:01:09 UTC

Last Updated

2020-04-06 20:49:06 UTC

GWAS-ROCS ID

GR00074

Study Information

Condition/Phenotype

Bladder cancer

GWAS Central Data Set ID

HGVRS6707

PubMed ID

24163127

Meta-Analysis (Yes/No)

Control Subjects

13125

Case Subjects

7712

SNPs

Name	Odds Ratio	Allele Frequency	p-value
rs9642880	1.24	0.45	4.0e-38
rs798766	1.22	0.19	7.0e-25
rs2204008	1.13	0.46	3.0e-15
rs8102137	1.13	0.33	1.0e-11
rs1014971	1.13	0.62	1.0e-11
rs710521	1.14	0.73	2.0e-11
rs401681	1.12	0.54	4.0e-11
rs1495741	1.14	0.8	2.0e-10
rs10936599	1.1765	0.76	5.0e-09
rs907611	1.15	0.31	4.0e-08
rs10775480	1.13	0.43	6.0e-08
rs11892031	1.17	0.92	1.0e-07
rs4510656	1.1236	0.55	7.0e-07
rs6104690	1.1236	0.56	7.0e-07

show all show less

Simulated Population

ROC Plot

AUROC

0.547829

Logistic Regression Equation

log(p/(1 - p)) = 0.812 - 15.744(rs9642880) - 0.185(rs798766) + 15.206(rs2204008) + 0.093(rs8102137) - 0.028(rs1014971) - 0.130(rs710521) + 0.199(rs401681) + 0.067(rs1495741) - 0.076(rs10936599) - 0.119(rs907611) + 0.326(rs10775480) - 0.102(rs11892031) - 0.073(rs4510656) + 0.012(rs6104690)

Heritability

0.009

Regression Type

OLS

Download File

GR00074.csv