Showing GR-Card for GR00004: Acute lymphoblastic leukemia (childhood) (HGVRS2578)

Record Information
Version1.0
Creation Date2019-04-04 18:01:07 UTC
Last Updated2020-04-06 20:49:05 UTC
GWAS-ROCS IDGR00004
Study Information
Condition/PhenotypeAcute lymphoblastic leukemia (childhood)
GWAS Central Data Set IDHGVRS2578
PubMed ID23007406
Meta-Analysis (Yes/No)No
Control Subjects1268
Case Subjects1268
SNPs
NameOdds RatioAllele Frequencyp-value
rs71421433.610.017.0e-09
rs170795344.070.0052.0e-07
rs178374972.340.0162.0e-06
rs101702361.450.2564.0e-06
rs14967662.840.0145.0e-06
rs99582081.620.0995.0e-06
rs66839771.410.4495.0e-06
rs75783611.40.2768.0e-06
rs413221522.520.0128.0e-06
rs5467841.40.4579.0e-06
Simulated Population
ROC PlotGr00004
AUROC0.598603
Logistic Regression Equationlog(p/(1 - p)) = 0.333 - 15.217(rs7142143) - 14.251(rs17079534) + 15.295(rs17837497) - 1.300(rs10170236) - 15.816(rs1496766) - 0.021(rs9958208) - 0.351(rs6683977) + 1.025(rs7578361) + 14.827(rs41322152) - 0.092(rs546784)
Heritability0.039
Regression TypeOLS
Download FileGR00004.csv